Product Details

SNP ID

rs200184532

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:64895363 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGGCTGCTGGCCCCTGCGCAGCCTC[C/T]GCGCAGAGCGCTTATCCTGCAGGGA

Phenotype

MIM: 616225 MIM: 610939 MIM: 610941

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

ATG2A PubMed Links

Additional Information

For this assay, SNP(s) [rs77802938] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ATG2A

Gene Name

autophagy related 2A

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_015104.2	5464	Missense Mutation			NP_055919.2
XM_005273849.3	5464	Missense Mutation			XP_005273906.1
XM_005273850.3	5464	Missense Mutation			XP_005273907.1
XM_011544863.2	5464	Missense Mutation			XP_011543165.1
XM_011544864.2	5464	Missense Mutation			XP_011543166.1
XM_011544865.2	5464	Missense Mutation			XP_011543167.1
XM_011544866.2	5464	UTR 3			XP_011543168.1
XM_011544867.2	5464	Intron			XP_011543169.1
XM_011544868.2	5464	Missense Mutation			XP_011543170.1

Gene

MIR192

Gene Name

microRNA 192

There are no transcripts associated with this gene.

Gene

MIR194-2

Gene Name

microRNA 194-2

There are no transcripts associated with this gene.

Gene

MIR194-2HG

Gene Name

MIR194-2 host gene

There are no transcripts associated with this gene.

Gene

MIR6749

Gene Name

microRNA 6749

There are no transcripts associated with this gene.

Gene

MIR6750

Gene Name

microRNA 6750

There are no transcripts associated with this gene.

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