Product Details

SNP ID
rs200800276
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.14:104085822 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
GAGGCTGCTGGCCGTCTACACCGGC[A/G]GCACCATTGGCATGCGGAGTGAGCT
Phenotype
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
ASPG PubMed Links
Additional Information
For this assay, SNP(s) [rs190574851] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
ASPG
Gene Name
asparaginase
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001080464.2 165 Missense Mutation AGC,GGC S18G NP_001073933.2
XM_005267590.4 165 Missense Mutation AGC,GGC S18G XP_005267647.1
XM_017021265.1 165 Intron XP_016876754.1
XM_017021266.1 165 Intron XP_016876755.1
XM_017021267.1 165 Intron XP_016876756.1
XM_017021268.1 165 Missense Mutation AGC,GGC S18G XP_016876757.1
XM_017021269.1 165 Intron XP_016876758.1
XM_017021270.1 165 Intron XP_016876759.1
XM_017021271.1 165 Intron XP_016876760.1
XM_017021272.1 165 Intron XP_016876761.1
XM_017021273.1 165 Intron XP_016876762.1
XM_017021274.1 165 Intron XP_016876763.1
XM_017021275.1 165 Intron XP_016876764.1
XM_017021276.1 165 Intron XP_016876765.1
Gene
LOC105370691
Gene Name
uncharacterized LOC105370691
There are no transcripts associated with this gene.

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