Product Details

SNP ID

rs199865474

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:54933137 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CGGCTTCAGGGACCACCCACCCCTG[C/T]AGGCAAGGAGACGGAGGGCAGCCTC

Phenotype

MIM: 615624 MIM: 606195

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CRNDE PubMed Links

Additional Information

For this assay, SNP(s) [rs13336114] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CRNDE

Gene Name

colorectal neoplasia differentially expressed (non-protein coding)

There are no transcripts associated with this gene.

Gene

IRX5

Gene Name

iroquois homeobox 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001252197.1	1159	Missense Mutation	GCA,GTA	A238V	NP_001239126.1
NM_005853.5	1159	Missense Mutation	GCA,GTA	A239V	NP_005844.4
XM_011522809.1	1159	Missense Mutation	GCA,GTA	A169V	XP_011521111.1

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