Product Details

SNP ID

rs201023513

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.22:36141393 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GATGCCTGAAGTGGTCGCACTCAGG[A/T]TCCGGGCTCCTCTGCTCACTGCCCG

Phenotype

MIM: 607253

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

APOL3 PubMed Links

Additional Information

For this assay, SNP(s) [rs132618] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

APOL3

Gene Name

apolipoprotein L3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_014349.2	1987	Missense Mutation	AAC,ATC	N268I	NP_055164.1
NM_030644.1	1987	Missense Mutation	AAC,ATC	N268I	NP_085147.1
NM_145639.1	1987	Missense Mutation	AAC,ATC	N268I	NP_663614.1
NM_145640.2	1987	Missense Mutation	AAC,ATC	N339I	NP_663615.1
NM_145641.2	1987	Missense Mutation	AAC,ATC	N139I	NP_663616.1
NM_145642.2	1987	Missense Mutation	AAC,ATC	N139I	NP_663617.1
XM_006724324.1	1987	Missense Mutation	AAC,ATC	N268I	XP_006724387.1
XM_006724325.2	1987	Missense Mutation	AAC,ATC	N268I	XP_006724388.1
XM_017028946.1	1987	Missense Mutation	AAC,ATC	N269I	XP_016884435.1
XM_017028947.1	1987	Missense Mutation	AAC,ATC	N269I	XP_016884436.1
XM_017028948.1	1987	Missense Mutation	AAC,ATC	N269I	XP_016884437.1
XM_017028949.1	1987	Missense Mutation	AAC,ATC	N269I	XP_016884438.1
XM_017028950.1	1987	Missense Mutation	AAC,ATC	N269I	XP_016884439.1
XM_017028951.1	1987	Missense Mutation	AAC,ATC	N269I	XP_016884440.1
XM_017028952.1	1987	Missense Mutation	AAC,ATC	N139I	XP_016884441.1

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