Product Details

SNP ID

rs200337847

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.4:87480468 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CTTAAAGTCCCTTAAGAGAAGATCA[A/G]TGGGATGGTCCCCAGCCAAAAGCCT

Phenotype

MIM: 606041

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

SPARCL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs9933] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SPARCL1

Gene Name

SPARC like 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001128310.2	1951	Missense Mutation	ACT,ATT	T574I	NP_001121782.1
NM_001291976.1	1951	Missense Mutation	ACT,ATT	T449I	NP_001278905.1
NM_001291977.1	1951	Missense Mutation	ACT,ATT	T449I	NP_001278906.1
NM_004684.5	1951	Missense Mutation	ACT,ATT	T574I	NP_004675.3

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