Product Details

SNP ID
rs202198770
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.4:15687957 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
AATGGTGCTGTGTGGAATCATTGTT[A/T]TATACATCGTGAAGGTTTAGCATCC
Phenotype
MIM: 600387 MIM: 605655
Polymorphism
A/T, Transversion Substitution
Allele Nomenclature
Literature Links
BST1 PubMed Links
Additional Information
For this assay, SNP(s) [rs11729955] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
BST1
Gene Name
bone marrow stromal cell antigen 1
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_004334.2 1959 Intron NP_004325.2
XM_005248185.1 1959 Intron XP_005248242.1
XM_005248186.1 1959 Intron XP_005248243.1
XM_011513878.2 1959 Intron XP_011512180.1
XM_011513879.1 1959 Intron XP_011512181.1
XM_011513881.2 1959 Intron XP_011512183.1
XM_017008565.1 1959 Intron XP_016864054.1
XM_017008566.1 1959 Intron XP_016864055.1
XM_017008567.1 1959 Intron XP_016864056.1
Gene
FAM200B
Gene Name
family with sequence similarity 200 member B
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001145191.1 1959 Missense Mutation TAT,TTT Y327F NP_001138663.1
XM_017008048.1 1959 Missense Mutation TAT,TTT Y327F XP_016863537.1
Gene
FBXL5
Gene Name
F-box and leucine rich repeat protein 5
There are no transcripts associated with this gene.

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