Product Details

SNP ID
rs201900739
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.5:179678675 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
ATCTTCCTCTGCCCGGCGCGCGCCG[C/T]AGCCGTCGGGATCACCTCGGGGTTG
Phenotype
MIM: 114217
Polymorphism
C/T, Transition Substitution
Allele Nomenclature
Literature Links
CANX PubMed Links
Additional Information
For this assay, SNP(s) [rs78613293] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
CANX
Gene Name
calnexin
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001024649.1 1546 Intron NP_001019820.1
NM_001746.3 1546 Intron NP_001737.1
XM_011534664.1 1546 Intron XP_011532966.1
XM_011534665.2 1546 UTR 5 XP_011532967.1
Gene
CBY3
Gene Name
chibby family member 3
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001164444.1 1546 Missense Mutation ACG,GCG T213A NP_001157916.1
XM_017009726.1 1546 Missense Mutation ACG,GCG T212A XP_016865215.1
Gene
LOC105377763
Gene Name
uncharacterized LOC105377763
There are no transcripts associated with this gene.

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