Product Details

SNP ID
rs200675121
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.6:29724174 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
GGGCTGACTGCGGGGACCGGCTAGG[A/G]TCTCACACCCTCCAGGGAATGAATG
Phenotype
MIM: 143110
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
HLA-F PubMed Links
Additional Information
For this assay, SNP(s) [rs2072895] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
HLA-F
Gene Name
major histocompatibility complex, class I, F
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001098478.1 366 Silent Mutation GGA,GGG G112G NP_001091948.1
NM_001098479.1 366 Silent Mutation GGA,GGG G112G NP_001091949.1
NM_018950.2 366 Silent Mutation GGA,GGG G112G NP_061823.2
XM_011514564.1 366 Silent Mutation GGA,GGG G112G XP_011512866.1
XM_017010810.1 366 Silent Mutation GGA,GGG G112G XP_016866299.1
XM_017010811.1 366 Silent Mutation GGA,GGG G112G XP_016866300.1
XM_017010812.1 366 Silent Mutation GGA,GGG G112G XP_016866301.1
XM_017010813.1 366 Silent Mutation GGA,GGG G112G XP_016866302.1
XM_017010814.1 366 Intron XP_016866303.1
XM_017010815.1 366 Intron XP_016866304.1
Gene
HLA-F-AS1
Gene Name
HLA-F antisense RNA 1
There are no transcripts associated with this gene.

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