Product Details

SNP ID

rs200013488

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:54308620 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGAAATCTGGATGGAGAAGCAGTAT[A/T]TATCTCAAAGAGAAGTGGACCTAGA

Phenotype

MIM: 606749

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

TINAG PubMed Links

Additional Information

For this assay, SNP(s) [rs2297980] are located under a probe and SNP(s) [rs16885197] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

TINAG

Gene Name

tubulointerstitial nephritis antigen

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_014464.3	216	Missense Mutation	ATA,TTA	I24L	NP_055279.3
XM_006715062.2	216	Missense Mutation	ATA,TTA	I6L	XP_006715125.1
XM_011514497.2	216	Missense Mutation	ATA,TTA	I24L	XP_011512799.1
XM_017010745.1	216	Missense Mutation	ATA,TTA	I24L	XP_016866234.1
XM_017010746.1	216	Missense Mutation	ATA,TTA	I24L	XP_016866235.1
XM_017010747.1	216	Missense Mutation	ATA,TTA	I24L	XP_016866236.1
XM_017010748.1	216	Intron			XP_016866237.1

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