Product Details

SNP ID

rs200119534

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:101218207 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTTGTGTTGTGCCAATGGTGGAGAA[A/G]AAAACTTCGGGTATGTGAGCCCCCG

Phenotype

MIM: 603066

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

PLOD3 PubMed Links

Additional Information

For this assay, SNP(s) [rs11769624] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PLOD3

Gene Name

procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001084.4	504	Intron			NP_001075.1

Gene

ZNHIT1

Gene Name

zinc finger HIT-type containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_006349.2	504	Silent Mutation	AAA,AAG	K4K	NP_006340.1
XM_011515739.2	504	Intron			XP_011514041.1

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