Product Details

SNP ID

rs200713455

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.8:55773664 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCGCGTGGCGGAAATGTTTCTCTTC[A/G]TTGAGGAGCGGGAGGATTGTAAGAT

Phenotype

MIM: 606461

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

TGS1 PubMed Links

Additional Information

For this assay, SNP(s) [rs1818] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

TGS1

Gene Name

trimethylguanosine synthase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001317902.1	219	UTR 5			NP_001304831.1
NM_024831.7	219	Missense Mutation	ATT,GTT	I16V	NP_079107.6
XM_005251328.2	219	UTR 5			XP_005251385.1
XM_006716485.2	219	Missense Mutation	ATT,GTT	I16V	XP_006716548.1
XM_017014004.1	219	Missense Mutation	ATT,GTT	I16V	XP_016869493.1

Gene

TMEM68

Gene Name

transmembrane protein 68

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001286657.1	219	Intron			NP_001273586.1
NM_001286660.1	219	Intron			NP_001273589.1
NM_001286661.1	219	Intron			NP_001273590.1
NM_152417.2	219	Intron			NP_689630.1
XM_005251150.1	219	Intron			XP_005251207.1
XM_011517454.1	219	Intron			XP_011515756.1
XM_011517455.2	219	Intron			XP_011515757.1
XM_017013040.1	219	Intron			XP_016868529.1

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