Product Details

SNP ID

rs200727971

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.9:122371239 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTGCTCCTGCTCCCGCCGCTCCCC[A/G]TCCTGCTCGCGGACCCAGGGGCGCC

Phenotype

MIM: 176805

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

PTGS1 PubMed Links

Additional Information

For this assay, SNP(s) [rs1236913] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTGS1

Gene Name

prostaglandin-endoperoxide synthase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000962.3	367	Missense Mutation	ATC,GTC	I21V	NP_000953.2
NM_001271164.1	367	Missense Mutation	ATC,GTC	I21V	NP_001258093.1
NM_001271165.1	367	Intron			NP_001258094.1
NM_001271166.1	367	UTR 5			NP_001258095.1
NM_001271367.1	367	UTR 5			NP_001258296.1
NM_001271368.1	367	UTR 5			NP_001258297.1
NM_080591.2	367	Missense Mutation	ATC,GTC	I21V	NP_542158.1
XM_005252105.3	367	UTR 5			XP_005252162.1
XM_011518875.2	367	UTR 5			XP_011517177.1
XM_011518876.2	367	UTR 5			XP_011517178.1
XM_017014929.1	367	UTR 5			XP_016870418.1

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