Product Details

SNP ID

rs2123158

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.15:82995130 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GAGCAGATTATCTCCTCTTTTCTAG[G/A]AGTCTGGTTGATTACTGCTGGCACC

Phenotype

MIM: 614547 MIM: 604799

Polymorphism

G/A, Transition Substitution

Allele Nomenclature

Literature Links

C15orf40 PubMed Links

Additional Information

For this assay, SNP(s) [rs5814133] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

C15orf40

Gene Name

chromosome 15 open reading frame 40

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001160113.1	1312	Intron			NP_001153585.1
NM_001160114.1	1312	Intron			NP_001153586.1
NM_001160115.1	1312	Intron			NP_001153587.1
NM_001160116.1	1312	Intron			NP_001153588.1
NM_144597.2	1312	Intron			NP_653198.2
XM_006720385.2	1312	UTR 3			XP_006720448.1
XM_011521212.2	1312	UTR 3			XP_011519514.1
XM_011521213.2	1312	Intron			XP_011519515.1
XM_011521214.2	1312	Intron			XP_011519516.1

Gene

FAM103A1

Gene Name

family with sequence similarity 103 member A1

There are no transcripts associated with this gene.

Gene

HOMER2

Gene Name

homer scaffolding protein 2

There are no transcripts associated with this gene.

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