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SNP ID: rs3179004
Assay Type: Validated
NCBI dbSNP Submissions: NA
Location: Chr.6:31589145 on Build GRCh38
Set Membership: Validated
Context Sequence [VIC/FAM]: GGAGGGGCGCTGGGACCACAGCCGG[C/T]AGCTGCCTTCTTGGACCTTTCCAGG
Phenotype: MIM: 109170 MIM: 600978 MIM: 611550
Polymorphism: C/T, Transition substitution
Allele Nomenclature
Literature Links: LST1 PubMed Links

Gene Details

Gene: LST1
Gene Name: leukocyte specific transcript 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001166538.1	738	Intron			NP_001160010.1
NM_007161.3	738	Intron			NP_009092.3
NM_205837.2	738	Intron			NP_995309.2
NM_205838.2	738	Intron			NP_995310.2
NM_205839.2	738	Intron			NP_995311.2
NM_205840.2	738	Intron			NP_995312.2
XM_006715206.3	738	Intron			XP_006715269.1
XM_006715209.3	738	Intron			XP_006715272.1
XM_006715210.3	738	Intron			XP_006715273.1
XM_011514914.2	738	Intron			XP_011513216.1

Gene: LTB
Gene Name: lymphotoxin beta

There are no transcripts associated with this gene.

Gene: NCR3
Gene Name: natural cytotoxicity triggering receptor 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001145466.1	738	UTR 3			NP_001138938.1
NM_001145467.1	738	Intron			NP_001138939.1
NM_147130.2	738	Silent Mutation	CTA,CTG	L176L	NP_667341.1
XM_006715049.3	738	Silent Mutation	CTA,CTG	L176L	XP_006715112.1
XM_011514459.2	738	Silent Mutation	CTA,CTG	L151L	XP_011512761.1

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