Product Details

SNP ID

rs3213628

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.12:111842969 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

GGGTGTAGGTGTGTGTCCGACTCCC[G/T]CCAGCTTCCCTGGTGAGTGTGATTT

Phenotype

MIM: 606723

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

MAPKAPK5 PubMed Links

Additional Information

For this assay, SNP(s) [rs138881887] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

MAPKAPK5

Gene Name

mitogen-activated protein kinase-activated protein kinase 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_003668.3		Intron			NP_003659.2
NM_139078.2		Intron			NP_620777.1
XM_017020125.1		Intron			XP_016875614.1
XM_017020126.1		Intron			XP_016875615.1
XM_017020127.1		Intron			XP_016875616.1
XM_017020128.1		Intron			XP_016875617.1
XM_017020129.1		Intron			XP_016875618.1
XM_017020130.1		Intron			XP_016875619.1
XM_017020131.1		Intron			XP_016875620.1
XM_017020132.1		Intron			XP_016875621.1
XM_017020133.1		Intron			XP_016875622.1
XM_017020134.1		Intron			XP_016875623.1
XM_017020135.1		Intron			XP_016875624.1
XM_017020136.1		Intron			XP_016875625.1
XM_017020137.1		Intron			XP_016875626.1
XM_017020138.1		Intron			XP_016875627.1
XM_017020139.1		Intron			XP_016875628.1

Gene

MAPKAPK5-AS1

Gene Name

MAPKAPK5 antisense RNA 1

There are no transcripts associated with this gene.

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