Product Details

SNP ID

rs3739121

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.2:200306291 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

CTGAGGGAGCAAAGTTCATTTTCTC[G/C]GGTAGGAGAAGATGATTCTCTTGCA

Phenotype

MIM: 613817

Polymorphism

G/C, Transversion Substitution

Allele Nomenclature

Literature Links

SPATS2L PubMed Links

Additional Information

For this assay, SNP(s) [rs185341792] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SPATS2L

Gene Name

spermatogenesis associated serine rich 2 like

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001100422.1	9	UTR 5			NP_001093892.1
NM_001100423.1	9	Intron			NP_001093893.1
NM_001100424.1	9	UTR 5			NP_001093894.1
NM_001282735.1	9	UTR 5			NP_001269664.1
NM_001282743.1	9	UTR 5			NP_001269672.1
NM_001282744.1	9	Intron			NP_001269673.1
NM_015535.2	9	Intron			NP_056350.2
XM_005246456.1	9	Intron			XP_005246513.1
XM_005246457.1	9	UTR 5			XP_005246514.1
XM_005246458.1	9	Intron			XP_005246515.1
XM_005246459.1	9	Intron			XP_005246516.1
XM_011510938.1	9	Intron			XP_011509240.1
XM_011510939.1	9	UTR 5			XP_011509241.1
XM_017003783.1	9	Intron			XP_016859272.1
XM_017003784.1	9	Intron			XP_016859273.1
XM_017003785.1	9	Intron			XP_016859274.1
XM_017003786.1	9	Intron			XP_016859275.1
XM_017003787.1	9	UTR 5			XP_016859276.1

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