Product Details

SNP ID

rs79339000

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:37993580 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTCCTAATAAAAGTCATGTTCTAT[A/G]ATGAAGTTGTACAGGTAGCCAGGTG

Phenotype

MIM: 608592

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CTDSPL PubMed Links

Additional Information

For this assay, SNP(s) [rs542152054] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CTDSPL

Gene Name

CTD small phosphatase like

There are no transcripts associated with this gene.

Gene

VILL

Gene Name

villin like

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_015873.3		Intron			NP_056957.3
XM_005265191.3		Intron			XP_005265248.1
XM_005265192.4		Intron			XP_005265249.1
XM_006713184.3		Intron			XP_006713247.1
XM_011533770.2		Intron			XP_011532072.1
XM_011533771.1		Intron			XP_011532073.1
XM_011533773.2		Intron			XP_011532075.1

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