Product Details

SNP ID

rs2718740

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:108541781 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCTTTTGTGTTTTCTTGGCAGCTGG[A/G]ACAAAATTGCCGCTTCTCTCATAAA

Phenotype

MIM: 602567

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

GCC2-AS1 PubMed Links

Additional Information

For this assay, SNP(s) [rs76274834] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GCC2-AS1

Gene Name

GCC2 antisense RNA 1

There are no transcripts associated with this gene.

Gene

LIMS1

Gene Name

LIM zinc finger domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001193482.1		Intron			NP_001180411.1
NM_001193483.2		Intron			NP_001180412.1
NM_001193484.1		Intron			NP_001180413.1
NM_001193485.2		Intron			NP_001180414.1
NM_001193488.1		Intron			NP_001180417.1
NM_004987.5		Intron			NP_004978.2
XM_005263946.1		Intron			XP_005264003.1
XM_005263948.3		Intron			XP_005264005.1
XM_005263949.1		Intron			XP_005264006.1
XM_005263950.1		Intron			XP_005264007.1
XM_005263951.4		Intron			XP_005264008.1
XM_017004091.1		Intron			XP_016859580.1
XM_017004092.1		Intron			XP_016859581.1
XM_017004093.1		Intron			XP_016859582.1
XM_017004094.1		Intron			XP_016859583.1
XM_017004095.1		Intron			XP_016859584.1
XM_017004096.1		Intron			XP_016859585.1

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