Product Details

SNP ID

rs11642030

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:69571308 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GACAGAGTGAGACTCTGTCTCAAAA[A/C]AACAACAACAAACAAACAAACAAAC

Phenotype

MIM: 604708

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

MIR1538 PubMed Links

Additional Information

For this assay, SNP(s) [rs141981673] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

MIR1538

Gene Name

microRNA 1538

There are no transcripts associated with this gene.

Gene

NFAT5

Gene Name

nuclear factor of activated T-cells 5, tonicity-responsive

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001113178.2		Intron			NP_001106649.1
NM_006599.3		Intron			NP_006590.1
NM_138713.3		Intron			NP_619727.2
NM_138714.3		Intron			NP_619728.2
NM_173214.2		Intron			NP_775321.1
NM_173215.2		Intron			NP_775322.1
XM_006721125.3		Intron			XP_006721188.1
XM_011522817.2		Intron			XP_011521119.1
XM_011522818.2		Intron			XP_011521120.1
XM_011522819.2		Intron			XP_011521121.1
XM_011522820.2		Intron			XP_011521122.1
XM_011522822.2		Intron			XP_011521124.1
XM_017022870.1		Intron			XP_016878359.1
XM_017022871.1		Intron			XP_016878360.1
XM_017022872.1		Intron			XP_016878361.1
XM_017022873.1		Intron			XP_016878362.1

View Full Product Details