Product Details

SNP ID

rs359597

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.9:125274312 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GGATTACAGGTGTGAGCCACTATCC[C/T]GGGCCTGTTCTTTGTTTTTTTAAAA

Phenotype

MIM: 611714

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GAPVD1 PubMed Links

Additional Information

For this assay, SNP(s) [rs117612404] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GAPVD1

Gene Name

GTPase activating protein and VPS9 domains 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001282679.1		Intron			NP_001269608.1
NM_001282680.1		Intron			NP_001269609.1
NM_001282681.1		Intron			NP_001269610.1
NM_015635.3		Intron			NP_056450.2
XM_005251901.3		Intron			XP_005251958.1
XM_005251904.3		Intron			XP_005251961.1
XM_006717044.3		Intron			XP_006717107.1
XM_011518499.2		Intron			XP_011516801.1
XM_011518500.2		Intron			XP_011516802.1
XM_011518502.2		Intron			XP_011516804.1
XM_011518506.2		Intron			XP_011516808.1
XM_011518507.2		Intron			XP_011516809.1
XM_017014600.1		Intron			XP_016870089.1
XM_017014601.1		Intron			XP_016870090.1
XM_017014602.1		Intron			XP_016870091.1
XM_017014603.1		Intron			XP_016870092.1
XM_017014604.1		Intron			XP_016870093.1
XM_017014605.1		Intron			XP_016870094.1
XM_017014606.1		Intron			XP_016870095.1
XM_017014607.1		Intron			XP_016870096.1
XM_017014608.1		Intron			XP_016870097.1
XM_017014609.1		Intron			XP_016870098.1
XM_017014610.1		Intron			XP_016870099.1
XM_017014611.1		Intron			XP_016870100.1

View Full Product Details