Product Details

SNP ID

rs132849

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.22:45164027 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CGAGTTACAAAATGGCCGCCCGGAG[C/T]GTGTTCGGCGCGGTTCCCCCAGCTG

Phenotype

MIM: 604646

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

NUP50 PubMed Links

Additional Information

For this assay, SNP(s) [rs3788637] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

NUP50

Gene Name

nucleoporin 50

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_007172.3		Intron			NP_009103.2
NM_153645.2		Intron			NP_705931.1
XM_005261312.1		Intron			XP_005261369.1
XM_005261314.1		Intron			XP_005261371.1
XM_006724103.1		Intron			XP_006724166.1
XM_006724104.1		Intron			XP_006724167.1
XM_011529833.1		Intron			XP_011528135.1
XM_017028537.1		Intron			XP_016884026.1
XM_017028538.1		Intron			XP_016884027.1

Gene

NUP50-AS1

Gene Name

NUP50 antisense RNA 1 (head to head)

There are no transcripts associated with this gene.

View Full Product Details