Product Details

SNP ID

rs3806393

Assay Type

Functionally Tested

NCBI dbSNP Submissions

39

Location

Chr.1:235329231 on Build GRCh38

Set Membership

HapMap JSNP

Context Sequence [VIC/FAM]

ACCAGGCCCTTCCCTTTGAAAAGTC[G/T]TTTGCATGGGATGTTCACTTCTTAG

Phenotype

MIM: 609696 MIM: 606982

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

ARID4B PubMed Links

Additional Information

For this assay, SNP(s) [rs147822910] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ARID4B

Gene Name

AT-rich interaction domain 4B

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001206794.1		Intron			NP_001193723.1
NM_016374.5		Intron			NP_057458.4
NM_031371.3		Intron			NP_112739.2
XM_006711781.2		Intron			XP_006711844.1
XM_011544212.2		Intron			XP_011542514.1
XM_017001468.1		Intron			XP_016856957.1
XM_017001469.1		Intron			XP_016856958.1
XM_017001470.1		Intron			XP_016856959.1
XM_017001471.1		Intron			XP_016856960.1
XM_017001472.1		Intron			XP_016856961.1

Gene

GGPS1

Gene Name

geranylgeranyl diphosphate synthase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001037277.1		Intron			NP_001032354.1

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