Product Details

SNP ID

hCV27831748

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:132672524 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TTGTGAGATGGAGATGAGGAGGAAC[A/C]CTCCGATTTTTTGGCAGGCCCTGTT

Phenotype

MIM: 610450 MIM: 608789

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

LYPD1 PubMed Links

Additional Information

For this assay, SNP(s) [rs114278512] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LYPD1

Gene Name

LY6/PLAUR domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001077427.3	6869	Intron			NP_001070895.1
NM_001321234.1	6869	Intron			NP_001308163.1
NM_001321235.1	6869	Intron			NP_001308164.1
NM_144586.6	6869	Intron			NP_653187.3

Gene

NCKAP5

Gene Name

NCK associated protein 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_207363.2	6869	UTR 3			NP_997246.2
NM_207481.3	6869	UTR 3			NP_997364.3

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