Product Details

SNP ID
rs6736360
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.2:189884023 on Build GRCh38
Set Membership
HapMap
Context Sequence [VIC/FAM]
TAACATTTACACCCAGATGCTTAAT[A/C]AGACAAAGTAATGACTGGTAATTTA
Phenotype
MIM: 615117 MIM: 600258
Polymorphism
A/C, Transversion Substitution
Allele Nomenclature
Literature Links
C2orf88 PubMed Links
Additional Information
For this assay, SNP(s) [rs138997788] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
C2orf88
Gene Name
chromosome 2 open reading frame 88
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001042519.1 Intron NP_001035984.1
NM_001042520.1 Intron NP_001035985.1
NM_001042521.1 Intron NP_001035986.1
NM_032321.2 Intron NP_115697.2
XM_005246905.1 Intron XP_005246962.1
XM_006712795.2 Intron XP_006712858.1
XM_011511982.1 Intron XP_011510284.1
XM_011511983.1 Intron XP_011510285.1
XM_011511984.2 Intron XP_011510286.1
XM_011511985.2 Intron XP_011510287.1
XM_011511986.2 Intron XP_011510288.1
XM_017005096.1 Intron XP_016860585.1
Gene
PMS1
Gene Name
PMS1 homolog 1, mismatch repair system component
There are no transcripts associated with this gene.

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