Product Details

SNP ID

rs3936006

Assay Type

Functionally tested

NCBI dbSNP Submissions

NA

Location

Chr.17:29930642 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AAACCCTCTCACTGGGCGCAGACAG[A/G]ACTGGGCTAGACCAGTTTACTCCCT

Phenotype

MIM: 606779

Polymorphism

A/G, Transition substitution

Allele Nomenclature

Literature Links

EFCAB5 PubMed Links

Gene Details

Gene

EFCAB5

Gene Name

EF-hand calcium binding domain 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001145053.1		Intron			NP_001138525.1
NM_198529.3		Intron			NP_940931.2
XM_011524759.1		Intron			XP_011523061.1
XM_011524763.2		Intron			XP_011523065.1
XM_011524765.1		Intron			XP_011523067.1
XM_011524766.2		Intron			XP_011523068.1
XM_011524768.2		Intron			XP_011523070.1
XM_017024591.1		Intron			XP_016880080.1
XM_017024592.1		Intron			XP_016880081.1

Gene

SSH2

Gene Name

slingshot protein phosphatase 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001282129.1		Intron			NP_001269058.1
NM_001282130.1		Intron			NP_001269059.1
NM_001282131.1		Intron			NP_001269060.1
NM_033389.3		Intron			NP_203747.2
XM_005258058.3		Intron			XP_005258115.1
XM_005258059.2		Intron			XP_005258116.1
XM_005258060.3		Intron			XP_005258117.1
XM_006722149.3		Intron			XP_006722212.1
XM_011525402.2		Intron			XP_011523704.1
XM_011525404.2		Intron			XP_011523706.1
XM_011525405.2		Intron			XP_011523707.1
XM_011525406.2		Intron			XP_011523708.1
XM_011525407.1		Intron			XP_011523709.1
XM_017025251.1		Intron			XP_016880740.1
XM_017025252.1		Intron			XP_016880741.1
XM_017025253.1		Intron			XP_016880742.1
XM_017025254.1		Intron			XP_016880743.1
XM_017025255.1		Intron			XP_016880744.1

View Full Product Details