Product Details

SNP ID

rs12983328

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.19:47026434 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ACCCACAGTGAGAGGGGAGCCACAG[A/T]GGTGGTGAGGGCGGAAGTAGGAGCC

Phenotype

MIM: 603346

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

NPAS1 PubMed Links

Additional Information

For this assay, SNP(s) [rs60003654] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

NPAS1

Gene Name

neuronal PAS domain protein 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001321086.1		Intron			NP_001308015.1
NM_002517.3		Intron			NP_002508.2
XM_006723231.2		Intron			XP_006723294.1
XM_011526997.1		Intron			XP_011525299.1
XM_011526999.1		Intron			XP_011525301.1
XM_011527001.1		Intron			XP_011525303.1
XM_011527002.1		Intron			XP_011525304.1
XM_011527006.1		Intron			XP_011525308.1
XM_011527007.1		Intron			XP_011525309.1
XM_017026841.1		Intron			XP_016882330.1
XM_017026842.1		Intron			XP_016882331.1
XM_017026843.1		Intron			XP_016882332.1
XM_017026844.1		Intron			XP_016882333.1

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