Product Details

SNP ID

rs12617777

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:42762870 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GTCCCTCCAGGCCAGAGCGCGGCAG[A/C]CCTTACCCCCACAGCGCTGCAGCCC

Phenotype

MIM: 604521 MIM: 609050

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

HAAO PubMed Links

Additional Information

For this assay, SNP(s) [rs79735204] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HAAO

Gene Name

3-hydroxyanthranilate 3,4-dioxygenase

There are no transcripts associated with this gene.

Gene

MTA3

Gene Name

metastasis associated 1 family member 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001282755.1	1392	Intron			NP_001269684.1
NM_001282756.1	1392	Intron			NP_001269685.1
NM_020744.3	1392	Intron			NP_065795.1
XM_005264456.2	1392	Intron			XP_005264513.1
XM_005264458.2	1392	Intron			XP_005264515.1
XM_005264459.2	1392	Intron			XP_005264516.1
XM_017004561.1	1392	Intron			XP_016860050.1
XM_017004562.1	1392	Intron			XP_016860051.1

Gene

OXER1

Gene Name

oxoeicosanoid receptor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_148962.4	1392	UTR 3			NP_683765.1

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