Product Details

SNP ID

rs13012392

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:134129756 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TTACTTGTTCTGGCTTATGTAATTG[G/T]GAGCCATCCTACTGAGAGGTGACAA

Phenotype

MIM: 601774

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

MGAT5 PubMed Links

Additional Information

For this assay, SNP(s) [rs58781832] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

MGAT5

Gene Name

mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_002410.4		Intron			NP_002401.1
XM_005263668.4		Intron			XP_005263725.1
XM_005263669.4		Intron			XP_005263726.1
XM_005263670.3		Intron			XP_005263727.1
XM_006712534.3		Intron			XP_006712597.1
XM_011511199.2		Intron			XP_011509501.1
XM_011511200.1		Intron			XP_011509502.1
XM_011511201.2		Intron			XP_011509503.1
XM_011511202.1		Intron			XP_011509504.1
XM_011511204.2		Intron			XP_011509506.1
XM_017004147.1		Intron			XP_016859636.1
XM_017004148.1		Intron			XP_016859637.1
XM_017004149.1		Intron			XP_016859638.1

Gene

MIR3679

Gene Name

microRNA 3679

There are no transcripts associated with this gene.

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