Product Details

SNP ID

rs7816998

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.8:38399988 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GAGAGAGAGAGAGAGATAGTATCTC[A/G]TGCTAAATAATTATAAAGCCTCCCA

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LETM2 PubMed Links

Additional Information

For this assay, SNP(s) [rs572660676] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LETM2

Gene Name

leucine zipper and EF-hand containing transmembrane protein 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001199659.2		Intron			NP_001186588.1
NM_001199660.2		Intron			NP_001186589.1
NM_001286787.1		Intron			NP_001273716.1
NM_001286819.1		Intron			NP_001273748.1
NM_001286821.1		Intron			NP_001273750.1
NM_144652.3		Intron			NP_653253.1
XM_006716291.3		Intron			XP_006716354.1
XM_011544406.1		Intron			XP_011542708.1
XM_011544407.1		Intron			XP_011542709.1
XM_011544408.2		Intron			XP_011542710.1
XM_011544409.2		Intron			XP_011542711.1
XM_011544410.2		Intron			XP_011542712.1
XM_017013051.1		Intron			XP_016868540.1
XM_017013052.1		Intron			XP_016868541.1
XM_017013053.1		Intron			XP_016868542.1
XM_017013054.1		Intron			XP_016868543.1
XM_017013055.1		Intron			XP_016868544.1
XM_017013056.1		Intron			XP_016868545.1
XM_017013057.1		Intron			XP_016868546.1

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