Product Details

SNP ID

rs11546821

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:2213839 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTGATTATTCTTCACATCCCCTAG[A/G]GTGGAGACTCCGGTGAGGGTCAGGA

Phenotype

MIM: 603022 MIM: 612190 MIM: 172280

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

BRICD5 PubMed Links

Additional Information

For this assay, SNP(s) [rs116977380] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

BRICD5

Gene Name

BRICHOS domain containing 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_182563.3	899	Intron			NP_872369.2
XM_005255263.4	899	Intron			XP_005255320.1

Gene

E4F1

Gene Name

E4F transcription factor 1

There are no transcripts associated with this gene.

Gene

MLST8

Gene Name

MTOR associated protein, LST8 homolog

There are no transcripts associated with this gene.

Gene

PGP

Gene Name

phosphoglycolate phosphatase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001042371.2	899	Silent Mutation	ACC,ACT	T285T	NP_001035830.1

View Full Product Details