Product Details

SNP ID

rs61753093

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:2538327 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGTTGGGGCTGCCCCTGGCCTCCCG[A/C]AGGCTGCTGTAGGAAGCAATCTTGT

Phenotype

MIM: 614506 MIM: 602576

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

BRAT1 PubMed Links

Additional Information

For this assay, SNP(s) [rs60152725] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

BRAT1

Gene Name

BRCA1 associated ATM activator 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_152743.3	2439	Silent Mutation			NP_689956.2
XM_005249643.4	2439	Silent Mutation			XP_005249700.1
XM_011515177.2	2439	Silent Mutation			XP_011513479.1
XM_011515178.1	2439	Silent Mutation			XP_011513480.1
XM_011515179.2	2439	Silent Mutation			XP_011513481.1
XM_011515181.2	2439	Silent Mutation			XP_011513483.1
XM_011515182.2	2439	Silent Mutation			XP_011513484.1
XM_011515183.1	2439	Silent Mutation			XP_011513485.1
XM_011515184.2	2439	Silent Mutation			XP_011513486.1
XM_011515186.2	2439	UTR 3			XP_011513488.1
XM_017011833.1	2439	Silent Mutation			XP_016867322.1
XM_017011834.1	2439	Silent Mutation			XP_016867323.1
XM_017011835.1	2439	Silent Mutation			XP_016867324.1
XM_017011836.1	2439	UTR 3			XP_016867325.1

Gene

LFNG

Gene Name

LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

There are no transcripts associated with this gene.

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