Product Details

SNP ID

rs7601782

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:11156366 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TTCAAAGTATTCATCATGCCAGAGC[C/G]CCAAACTTTTGGGGTATCATTTTTG

Phenotype

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

C2orf50 PubMed Links

Additional Information

For this assay, SNP(s) [rs77173613] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

C2orf50

Gene Name

chromosome 2 open reading frame 50

There are no transcripts associated with this gene.

Gene

PQLC3

Gene Name

PQ loop repeat containing 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001282710.1		Intron			NP_001269639.1
NM_001282711.1		Intron			NP_001269640.1
NM_001282712.1		Intron			NP_001269641.1
NM_152391.4		Intron			NP_689604.1
XM_011510315.1		Intron			XP_011508617.1

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