Product Details

SNP ID

rs10123342

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.9:92325542 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

GAGCCTAAACCAAAATCCCCTAGTT[G/T]CTATTGAACACTATCGCTGTGTGTA

Phenotype

MIM: 611505 MIM: 611534

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

CENPP PubMed Links

Additional Information

For this assay, SNP(s) [rs41277649] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CENPP

Gene Name

centromere protein P

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001012267.2	86	UTR 5			NP_001012267.1
NM_001286969.1	86	UTR 5			NP_001273898.1
NM_001286971.1	86	Intron			NP_001273900.1
XM_011518685.2	86	UTR 5			XP_011516987.1
XM_011518689.1	86	UTR 5			XP_011516991.1
XM_017014715.1	86	UTR 5			XP_016870204.1

Gene

NOL8

Gene Name

nucleolar protein 8

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001256394.1	86	UTR 5			NP_001243323.1
NM_017948.5	86	UTR 5			NP_060418.4
XM_006717166.3	86	Intron			XP_006717229.1
XM_006717167.3	86	UTR 5			XP_006717230.1
XM_006717168.3	86	Intron			XP_006717231.1
XM_006717169.3	86	Intron			XP_006717232.1
XM_006717170.3	86	Intron			XP_006717233.1
XM_006717172.3	86	Intron			XP_006717235.1
XM_006717173.3	86	Intron			XP_006717236.1
XM_011518824.2	86	Intron			XP_011517126.1
XM_011518827.2	86	Intron			XP_011517129.1
XM_017014876.1	86	Intron			XP_016870365.1
XM_017014877.1	86	Intron			XP_016870366.1
XM_017014878.1	86	Intron			XP_016870367.1
XM_017014879.1	86	Intron			XP_016870368.1
XM_017014880.1	86	Intron			XP_016870369.1

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