Product Details

SNP ID

rs17075821

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:114056982 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCTGAATCAAAGGAAGACTAACTCT[C/T]TGAGAATAGCTGAAGTCACTTTCCC

Phenotype

MIM: 609407

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

HS3ST5 PubMed Links

Additional Information

For this assay, SNP(s) [rs74668424] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HS3ST5

Gene Name

heparan sulfate-glucosamine 3-sulfotransferase 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_153612.3	3006	UTR 3			NP_705840.2
XM_006715379.2	3006	UTR 3			XP_006715442.1
XM_011535588.2	3006	UTR 3			XP_011533890.1
XM_017010470.1	3006	UTR 3			XP_016865959.1
XM_017010471.1	3006	UTR 3			XP_016865960.1
XM_017010472.1	3006	UTR 3			XP_016865961.1
XM_017010473.1	3006	UTR 3			XP_016865962.1
XM_017010474.1	3006	UTR 3			XP_016865963.1

Gene

LOC101927768

Gene Name

uncharacterized LOC101927768

There are no transcripts associated with this gene.

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