Product Details

SNP ID

rs11210864

Assay Type

Functionally Tested

NCBI dbSNP Submissions

42

Location

Chr.1:43526161 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGGAGGAGAGGTGTGTGGGTTTGCG[A/G]ATTTGGTAGTGGGAGATGAGGGAGT

Phenotype

MIM: 179590

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

PTPRF PubMed Links

Additional Information

For this assay, SNP(s) [rs115313274] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTPRF

Gene Name

protein tyrosine phosphatase, receptor type F

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
XM_005271079.3		Intron			XP_005271136.1
XM_005271080.3		Intron			XP_005271137.1
XM_005271081.3		Intron			XP_005271138.1
XM_005271082.3		Intron			XP_005271139.1
XM_006710795.3		Intron			XP_006710858.1
XM_006710796.3		Intron			XP_006710859.1
XM_006710797.3		Intron			XP_006710860.1
XM_006710798.3		Intron			XP_006710861.1
XM_006710799.3		Intron			XP_006710862.1
XM_006710800.3		Intron			XP_006710863.1
XM_006710801.3		Intron			XP_006710864.1
XM_011541871.2		Intron			XP_011540173.1
XM_011541872.2		Intron			XP_011540174.1
XM_011541873.2		Intron			XP_011540175.1
XM_017001942.1		Intron			XP_016857431.1
XM_017001943.1		Intron			XP_016857432.1
XM_017001944.1		Intron			XP_016857433.1
XM_017001945.1		Intron			XP_016857434.1
XM_017001946.1		Intron			XP_016857435.1
XM_017001947.1		Intron			XP_016857436.1
XM_017001948.1		Intron			XP_016857437.1
XM_017001949.1		Intron			XP_016857438.1
XM_017001950.1		Intron			XP_016857439.1

View Full Product Details