Product Details

SNP ID

rs1235

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.14:46840293 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

TATATTCCAATTGCTTGCATAATCA[G/T]TTTTTTTAATCCTGGGGTGTTGAAA

Phenotype

MIM: 611128

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

MDGA2 PubMed Links

Additional Information

For this assay, SNP(s) [rs57253420] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

MDGA2

Gene Name

MAM domain containing glycosylphosphatidylinositol anchor 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001113498.2	4011	UTR 3			NP_001106970.3
NM_182830.4	4011	UTR 3			NP_878250.2
XM_011536519.2	4011	UTR 3			XP_011534821.1
XM_011536522.2	4011	Intron			XP_011534824.1
XM_011536525.2	4011	UTR 3			XP_011534827.1
XM_017021060.1	4011	UTR 3			XP_016876549.1
XM_017021061.1	4011	Intron			XP_016876550.1

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