Product Details

SNP ID

rs12473311

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:165214803 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AATGTATCCTGTATAACATAAGGAT[A/G]CAATGTTATAAAAATCTGGGTTTTG

Phenotype

MIM: 182390

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

SCN2A PubMed Links

Additional Information

For this assay, SNP(s) [rs78781497,rs79720927] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SCN2A

Gene Name

sodium voltage-gated channel alpha subunit 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001040142.1		Intron			NP_001035232.1
NM_001040143.1		Intron			NP_001035233.1
NM_021007.2		Intron			NP_066287.2
XM_005246753.3		Intron			XP_005246810.1
XM_005246755.4		Intron			XP_005246812.1
XM_017004655.1		Intron			XP_016860144.1
XM_017004656.1		Intron			XP_016860145.1
XM_017004657.1		Intron			XP_016860146.1
XM_017004658.1		Intron			XP_016860147.1
XM_017004659.1		Intron			XP_016860148.1

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