Product Details

SNP ID

rs6007806

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.22:46296342 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

AGCTCCCCAGCCGGCCTGTAAAACC[C/G]AGGACAGGCTCCCGCCACGCCCTCG

Phenotype

MIM: 607477

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

GTSE1 PubMed Links

Additional Information

For this assay, SNP(s) [rs7285629] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GTSE1

Gene Name

G2 and S-phase expressed 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_016426.6	462	Intron			NP_057510.4
XM_005261627.3	462	UTR 5			XP_005261684.1
XM_011530211.2	462	UTR 5			XP_011528513.1
XM_011530213.2	462	UTR 5			XP_011528515.1
XM_017028815.1	462	Intron			XP_016884304.1
XM_017028816.1	462	UTR 5			XP_016884305.1

Gene

GTSE1-AS1

Gene Name

GTSE1 antisense RNA 1 (head to head)

There are no transcripts associated with this gene.

Gene

TTC38

Gene Name

tetratricopeptide repeat domain 38

There are no transcripts associated with this gene.

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