Product Details

SNP ID

rs36052384

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.4:120687099 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TATTTTTATCTGAAATTTTAATTTA[A/G]ACGTACTTATTTTTAGAAGAGTATT

Phenotype

MIM: 614161

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

PRDM5 PubMed Links

Additional Information

For this assay, SNP(s) [rs79079174] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PRDM5

Gene Name

PR domain 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001300823.1		Intron			NP_001287752.1
NM_001300824.1		Intron			NP_001287753.1
NM_018699.3		Intron			NP_061169.2
XM_005262708.3		Intron			XP_005262765.1
XM_011531562.2		Intron			XP_011529864.1
XM_011531563.2		Intron			XP_011529865.1
XM_011531564.2		Intron			XP_011529866.1
XM_011531565.2		Intron			XP_011529867.1
XM_011531566.2		Intron			XP_011529868.1
XM_011531567.2		Intron			XP_011529869.1
XM_011531568.2		Intron			XP_011529870.1
XM_011531569.2		Intron			XP_011529871.1
XM_011531570.2		Intron			XP_011529872.1
XM_017007668.1		Intron			XP_016863157.1
XM_017007669.1		Intron			XP_016863158.1
XM_017007670.1		Intron			XP_016863159.1
XM_017007671.1		Intron			XP_016863160.1

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