Product Details

SNP ID

rs6518318

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.21:43729252 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CTGTCCTGTGGCAGCAGTGGGTTTG[C/T]CAGAGGCCGGGGGCTTTGGCCAGGG

Phenotype

MIM: 179020

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LOC105372824 PubMed Links

Additional Information

For this assay, SNP(s) [rs115081493,rs73373276] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOC105372824

Gene Name

uncharacterized LOC105372824

There are no transcripts associated with this gene.

Gene

PDXK

Gene Name

pyridoxal (pyridoxine, vitamin B6) kinase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_003681.4		Intron			NP_003672.1
XM_005261195.2		Intron			XP_005261252.2
XM_005261196.3		Intron			XP_005261253.1
XM_005261198.2		Intron			XP_005261255.1
XM_005261199.2		Intron			XP_005261256.1
XM_011529758.2		Intron			XP_011528060.1
XM_011529760.2		Intron			XP_011528062.1
XM_011529761.1		Intron			XP_011528063.1
XM_011529762.2		Intron			XP_011528064.1
XM_017028483.1		Intron			XP_016883972.1
XM_017028484.1		Intron			XP_016883973.1

View Full Product Details