Product Details

SNP ID

rs199228

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.8:139729878 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

ATGGGAGTTTCAGTGCCCAACGGGC[A/G]CCTGACGAGCCTGGTATCTGCTGGG

Phenotype

MIM: 611966

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

TRAPPC9 PubMed Links

Additional Information

For this assay, SNP(s) [rs115834868] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

TRAPPC9

Gene Name

trafficking protein particle complex 9

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001160372.3	4737	UTR 3			NP_001153844.1
NM_001321646.1	4737	UTR 3			NP_001308575.1
NM_031466.7	4737	UTR 3			NP_113654.4
XM_011517326.2	4737	Intron			XP_011515628.1
XM_011517328.2	4737	Intron			XP_011515630.1
XM_011517330.2	4737	UTR 3			XP_011515632.1
XM_017013893.1	4737	Intron			XP_016869382.1
XM_017013894.1	4737	UTR 3			XP_016869383.1

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