Product Details

SNP ID

rs1353776

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:134358628 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGGTGGAGGTGCTGTCTGGGGGGCC[C/G]TCAGTCTGGGTGCTCCCATCTCTGC

Phenotype

MIM: 614658

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

AMOTL2 PubMed Links

Additional Information

For this assay, SNP(s) [rs117533420] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AMOTL2

Gene Name

angiomotin like 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001278683.1	2366	Missense Mutation	GAC,GAG	D789E	NP_001265612.1
NM_001278685.1	2366	Missense Mutation	GAC,GAG	D729E	NP_001265614.1
NM_016201.3	2366	Missense Mutation	GAC,GAG	D732E	NP_057285.3
XM_006713654.2	2366	Missense Mutation	GAC,GAG	D731E	XP_006713717.1
XM_011512881.1	2366	Missense Mutation	GAC,GAG	D731E	XP_011511183.1
XM_017006580.1	2366	Missense Mutation	GAC,GAG	D732E	XP_016862069.1
XM_017006581.1	2366	Missense Mutation	GAC,GAG	D732E	XP_016862070.1
XM_017006582.1	2366	Missense Mutation	GAC,GAG	D732E	XP_016862071.1

Gene

MIR6827

Gene Name

microRNA 6827

There are no transcripts associated with this gene.

Gene

RPL39P5

Gene Name

ribosomal protein L39 pseudogene 5

There are no transcripts associated with this gene.

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