Product Details

SNP ID

rs1294639

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:7339052 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TAGATTAGCCAGTTCTAAGCCGACT[A/C]CAAATGCACGAGTGAGCACAGCCAG

Phenotype

MIM: 609996

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

COL28A1 PubMed Links

Additional Information

For this assay, SNP(s) [rs143005190] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

COL28A1

Gene Name

collagen type XXVIII alpha 1 chain

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001037763.2		Intron			NP_001032852.2
XM_011515358.2		Intron			XP_011513660.1
XM_011515359.2		Intron			XP_011513661.1
XM_011515360.2		Intron			XP_011513662.1
XM_011515362.2		Intron			XP_011513664.1
XM_011515363.2		Intron			XP_011513665.1
XM_011515364.2		Intron			XP_011513666.1
XM_011515365.2		Intron			XP_011513667.1
XM_011515366.2		Intron			XP_011513668.1
XM_017012131.1		Intron			XP_016867620.1
XM_017012132.1		Intron			XP_016867621.1
XM_017012133.1		Intron			XP_016867622.1

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