Product Details

SNP ID

rs1499057

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:201690 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GATGCTGGCAGATGATGATAAGAAT[A/G]ATAAATGCATTGAACTTGGTCAATA

Phenotype

MIM: 607416

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CHL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs112018364] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CHL1

Gene Name

cell adhesion molecule L1 like

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001253387.1		Intron			NP_001240316.1
NM_001253388.1		Intron			NP_001240317.1
NM_006614.3		Intron			NP_006605.2
XM_006712938.1		Intron			XP_006713001.1
XM_006712939.3		Intron			XP_006713002.1
XM_006712940.3		Intron			XP_006713003.1
XM_011533292.1		Intron			XP_011531594.1
XM_011533294.1		Intron			XP_011531596.1
XM_011533295.1		Intron			XP_011531597.1
XM_011533296.1		Intron			XP_011531598.1
XM_017005566.1		Intron			XP_016861055.1
XM_017005567.1		Intron			XP_016861056.1
XM_017005568.1		Intron			XP_016861057.1
XM_017005569.1		Intron			XP_016861058.1
XM_017005570.1		Intron			XP_016861059.1
XM_017005571.1		Intron			XP_016861060.1
XM_017005572.1		Intron			XP_016861061.1
XM_017005573.1		Intron			XP_016861062.1

Gene

LOC101927174

Gene Name

uncharacterized LOC101927174

There are no transcripts associated with this gene.

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