Product Details

SNP ID

rs2417861

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.12:20690646 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CCCTAAAAAAAACTAACACAAATTA[C/T]TCAATACAACAAATATCCACAGTGT

Phenotype

MIM: 123805 MIM: 613389

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PDE3A PubMed Links

Additional Information

For this assay, SNP(s) [rs114641595] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PDE3A

Gene Name

phosphodiesterase 3A

There are no transcripts associated with this gene.

Gene

SLCO1C1

Gene Name

solute carrier organic anion transporter family member 1C1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001145944.1	142	Intron			NP_001139416.1
NM_001145945.1	142	Intron			NP_001139417.1
NM_001145946.1	142	Intron			NP_001139418.1
NM_017435.4	142	Intron			NP_059131.1
XM_005253394.2	142	Intron			XP_005253451.1
XM_005253396.2	142	UTR 5			XP_005253453.1
XM_011520703.2	142	Intron			XP_011519005.1
XM_011520704.2	142	Intron			XP_011519006.1
XM_011520709.2	142	Intron			XP_011519011.1
XM_011520711.2	142	UTR 5			XP_011519013.1
XM_017019484.1	142	UTR 5			XP_016874973.1
XM_017019485.1	142	UTR 5			XP_016874974.1
XM_017019486.1	142	UTR 5			XP_016874975.1
XM_017019487.1	142	UTR 5			XP_016874976.1
XM_017019488.1	142	UTR 5			XP_016874977.1
XM_017019489.1	142	UTR 5			XP_016874978.1
XM_017019490.1	142	UTR 5			XP_016874979.1

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