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SNP ID: rs6800
Assay Type: Functionally tested
NCBI dbSNP Submissions: 40
Location: Chr.1:156292862 on Build GRCh38
Set Membership: HapMap JSNP
Context Sequence [VIC/FAM]: CCCCTGCCCGCCTCCAAAGTCCCCC[A/C]ACAAAGTATGAAGGAAGCCCCACCT
Phenotype: MIM: 610962 MIM: 615531
Polymorphism: A/C, Transversion substitution
Allele Nomenclature
Literature Links: GLMP PubMed Links

Gene Details

Gene: GLMP
Gene Name: glycosylated lysosomal membrane protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001256604.1	1106	UTR 3			NP_001243533.1
NM_001256605.1	1106	UTR 3			NP_001243534.1
NM_001256608.1	1106	UTR 3			NP_001243537.1
NM_001256609.1	1106	UTR 3			NP_001243538.1
NM_144580.2	1106	UTR 3			NP_653181.1
XM_011509117.2	1106	UTR 3			XP_011507419.1
XM_017000149.1	1106	UTR 3			XP_016855638.1

Gene: SMG5
Gene Name: SMG5, nonsense mediated mRNA decay factor

There are no transcripts associated with this gene.

Gene: TMEM79
Gene Name: transmembrane protein 79

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_032323.2	1106	Intron			NP_115699.1

Gene: VHLL
Gene Name: von Hippel-Lindau tumor suppressor like

There are no transcripts associated with this gene.

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