Product Details

SNP ID

rs762403

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.21:43724942 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CGATGCACTAGGTAGACCCTGTTTT[A/T]AAAAAAAAAAAATCCCCTGCTCTGC

Phenotype

MIM: 179020

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

PDXK PubMed Links

Additional Information

For this assay, SNP(s) [rs539439819] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PDXK

Gene Name

pyridoxal (pyridoxine, vitamin B6) kinase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_003681.4		Intron			NP_003672.1
XM_005261195.2		Intron			XP_005261252.2
XM_005261196.3		Intron			XP_005261253.1
XM_005261198.2		Intron			XP_005261255.1
XM_005261199.2		Intron			XP_005261256.1
XM_011529758.2		Intron			XP_011528060.1
XM_011529760.2		Intron			XP_011528062.1
XM_011529761.1		Intron			XP_011528063.1
XM_011529762.2		Intron			XP_011528064.1
XM_017028483.1		Intron			XP_016883972.1
XM_017028484.1		Intron			XP_016883973.1

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