Product Details

SNP ID

rs552427

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:197798795 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GCACTATGAATTTTTCTAGAACTGT[A/G]CTGTGTAGTATGGTAGCAACTAGCC

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LRCH3 PubMed Links

Additional Information

For this assay, SNP(s) [rs113944399] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LRCH3

Gene Name

leucine rich repeats and calponin homology domain containing 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_032773.3		Intron			NP_116162.1
XM_005269362.2		Intron			XP_005269419.1
XM_005269363.2		Intron			XP_005269420.1
XM_005269365.2		Intron			XP_005269422.1
XM_005269367.2		Intron			XP_005269424.1
XM_006713791.3		Intron			XP_006713854.1
XM_006713792.3		Intron			XP_006713855.1
XM_006713793.2		Intron			XP_006713856.1
XM_011513242.2		Intron			XP_011511544.1
XM_011513243.2		Intron			XP_011511545.1
XM_017007350.1		Intron			XP_016862839.1
XM_017007351.1		Intron			XP_016862840.1
XM_017007352.1		Intron			XP_016862841.1

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