Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: CAP
Entrez Gene ID: 36084
Gene Name: CAP-PA
Gene Aliases: CAP/Vinexin, CG18408, CG18409, CG3451, DCAP, Dmel\CG18408, Dmel_CG18408, Rexin, cap, rexin
Chromosome Location: Chr.2R: 10269016 - 10307024 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0033504

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001144164.2	NP_001137636.1	15 - 16	2190	72
	NM_001144165.2	NP_001137637.1	9 - 10	7303	72
	NM_001144166.3	NP_001137638.2	10 - 11	7444	72
	NM_001144167.1	NP_001137639.1	3 - 4	2046	72
	NM_001144168.2	NP_001137640.1	13 - 14	1713	72
	NM_001169639.2	NP_001163110.1	9 - 10	5121	72
	NM_001259309.2	NP_001246238.1	10 - 11	1558	72
	NM_001259310.2	NP_001246239.2	12 - 13	7723	72
	NM_001259311.2	NP_001246240.1	14 - 15	1761	72
	NM_001259312.2	NP_001246241.1	13 - 14	7582	72
	NM_001273930.1	NP_001260859.1	9 - 10	4417	72
	NM_001273931.1	NP_001260860.1	11 - 12	7435	72
	NM_001382041.1	NP_001369073.1	16 - 17	2468	72
	NM_001382042.1	NP_001369074.1	10 - 11	7774	72
	NM_001382043.1	NP_001369075.1	13 - 14	7912	72
	NM_001382044.1	NP_001369076.1	9 - 10	4747	72
	NM_001382045.1	NP_001369077.1	11 - 12	7765	72
	NM_136726.3	NP_610570.1	12 - 13	1552	72
	NM_136727.4	NP_610571.2	10 - 11	7336	72
	NM_136728.4	NP_610572.1	10 - 11	1467	72
	NM_165757.3	NP_724910.1	16 - 17	2211	72
	NM_165758.2	NP_724911.1	15 - 16	2399	72
	NM_165759.3	NP_724912.1	10 - 11	2410	72
	NM_165760.4	NP_724913.2	9 - 10	5094	72
	NM_165761.2	NP_724914.1	4 - 5	1265	72
	NM_165762.3	NP_724915.1	4 - 5	677	72
	NM_206073.3	NP_995795.1	11 - 12	1591	72
GenBank mRNA	AB053479.1	-	9 - 10	5105	72
	AB053482.1	-	3 - 4	2045	72
	AY061565.1	-	10 - 11	1434	72
	BT003217.1	-	16 - 17	2212	72
	BT003435.1	-	15 - 16	2171	72
	BT120189.1	-	10 - 11	1551	72