Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: sgg
Entrez Gene ID: 31248
Gene Name: shaggy
Gene Aliases: CG2621, DMSGG3, DMZ3K25Z, Dm Zw3, Dmel\CG2621, Dmel_CG2621, Dmsgg3, EG:155E2.3, EG:BACR7C10.8, GSK, GSK-3, GSK-3B, GSK-3beta, GSK-3betaSgg, GSK3, GSK3-beta, GSK3A, GSK3Beta, GSK3beta, GSK3beta/SGG, GSK3betagr, GSKbeta, Gsk-3, Gsk-3beta, Gsk3, Gsk3-beta, Gsk3beta, SGG, SGG/GSK3b, SHAGGY, Sgg, Sgg/Zw3/GSK3, Shaggy, ZW-3, ZW3, Zw-3, Zw3, Zw3-sh, Zw3/GSK3, Zw3[sgg], anon-WO03040301.254, gsk3, l(1)3Ba, l(1)G0055, l(1)G0183, l(1)G0263, l(1)G0335, l(1)zw3, sgg-1, sgg-zw3, sgg/GSK3, sgg/zw3, sgg10, sgg39, sgg46, zw-3, zw3, zw3(sgg), zw3/GSK3beta, zw3/sgg, zw3[sgg], zw[3]
Chromosome Location: Chr.X: 2633952 - 2679553 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0003371

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001042794.4	NP_001036259.2	5 - 6	1485	72
	NM_001169178.1	NP_001162649.1	6 - 7	1110	72
	NM_001169179.1	NP_001162650.1	5 - 6	732	72
	NM_001272263.1	NP_001259192.1	6 - 7	2556	72
	NM_001272264.1	NP_001259193.1	6 - 7	2687	72
	NM_057366.5	NP_476714.1	5 - 6	1117	72
	NM_057367.5	NP_476715.1	5 - 6	756	72
	NM_057368.5	NP_476716.2	4 - 5	2714	72
	NM_134278.3	NP_599105.1	5 - 6	1019	72
	NM_166947.3	NP_726822.1	5 - 6	964	72
	NM_166948.4	NP_726823.1	5 - 6	1117	72
	NM_206611.2	NP_996334.1	4 - 5	673	72
	NM_206612.3	NP_996335.1	4 - 5	1102	72
	NM_206613.3	NP_996336.1	7 - 8	1406	72
	NM_206614.3	NP_996337.1	6 - 7	1000	72
	NM_206615.2	NP_996338.1	5 - 6	930	72
GenBank mRNA	AY122193.1	-	5 - 6	1092	72
	BT050474.1	-	4 - 5	1052	72
	BT072831.1	-	5 - 6	741	72
	BT133153.1	-	4 - 5	2708	72
	X70863.1	-	-	1076	72